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(parent: f579596) | patch
Added the tests directory as I think this will solve all the non building problems
authorJorge Soares <j.s.soares@gmail.com>
Fri, 28 Nov 2014 09:08:12 +0000 (09:08 +0000)
committerJorge Soares <j.s.soares@gmail.com>
Fri, 28 Nov 2014 09:08:12 +0000 (09:08 +0000)
commit5eb39c8661c1a3fc0d13ead4a6c58eca1bf72897
treeb06b7778d2320c986ede70ce3b97cc812d3ea891tree | snapshot
parentf579596a1154ba38b2b3e1d92cb0d9e1319af530commit | diff
Added the tests directory as I think this will solve all the non building problems
92 files changed:
debian/rules diff | blob | history
tests/AlignmentFile_test.py [new file with mode: 0644] blob
tests/SamFile_test.py [new file with mode: 0644] blob
tests/TestUtils.py [new file with mode: 0644] blob
tests/_compile_test.pyx [new file with mode: 0644] blob
tests/_compile_test.pyxbld [new file with mode: 0644] blob
tests/_cython_flagstat.pyx [new file with mode: 0644] blob
tests/_cython_flagstat.pyxbld [new file with mode: 0644] blob
tests/compile_test.py [new file with mode: 0644] blob
tests/cython_flagstat.py [new file with mode: 0644] blob
tests/faidx_test.py [new file with mode: 0644] blob
tests/pysam_data/Makefile [new file with mode: 0644] blob
tests/pysam_data/ex1.bed [new file with mode: 0644] blob
tests/pysam_data/ex1.fa [new file with mode: 0644] blob
tests/pysam_data/ex1.fq [new file with mode: 0644] blob
tests/pysam_data/ex1.sam.gz [new file with mode: 0644] blob
tests/pysam_data/ex10.sam [new file with mode: 0644] blob
tests/pysam_data/ex3.sam [new file with mode: 0644] blob
tests/pysam_data/ex4.sam [new file with mode: 0644] blob
tests/pysam_data/ex5.sam [new file with mode: 0644] blob
tests/pysam_data/ex6.sam [new file with mode: 0644] blob
tests/pysam_data/ex7.sam.donottest [new file with mode: 0644] blob
tests/pysam_data/ex8.sam [new file with mode: 0644] blob
tests/pysam_data/ex9_fail.sam [new file with mode: 0644] blob
tests/pysam_data/ex9_nofail.sam [new file with mode: 0644] blob
tests/pysam_data/example_btag.sam [new file with mode: 0644] blob
tests/pysam_data/example_empty_header.sam [new file with mode: 0644] blob
tests/pysam_data/example_unmapped_reads_no_sq.sam [new file with mode: 0644] blob
tests/pysam_data/example_user_header.sam [new file with mode: 0644] blob
tests/pysam_data/issue100.sam [new file with mode: 0644] blob
tests/pysam_data/rg_with_tab.sam [new file with mode: 0644] blob
tests/pysam_data/softclip.sam [new file with mode: 0644] blob
tests/pysam_data/tag_bug.sam [new file with mode: 0644] blob
tests/pysam_data/test.gtf [new file with mode: 0644] blob
tests/pysam_data/test.gtf.gz [new file with mode: 0644] blob
tests/pysam_data/test_unaligned.sam [new file with mode: 0644] blob
tests/python_flagstat.py [new file with mode: 0644] blob
tests/refactoring.pl [new file with mode: 0644] blob
tests/refactoring.txt [new file with mode: 0644] blob
tests/samtools_test.py [new file with mode: 0644] blob
tests/tabix_data/example.bed.gz [new file with mode: 0644] blob
tests/tabix_data/example.bed.gz.tbi [new file with mode: 0644] blob
tests/tabix_data/example.gtf.gz [new file with mode: 0644] blob
tests/tabix_data/example.gtf.gz.tbi [new file with mode: 0644] blob
tests/tabix_data/example.sam.gz [new file with mode: 0644] blob
tests/tabix_data/example.sam.gz.tbi [new file with mode: 0644] blob
tests/tabix_data/example.vcf.gz [new file with mode: 0644] blob
tests/tabix_data/example.vcf.gz.tbi [new file with mode: 0644] blob
tests/tabix_data/example.vcf40 [new file with mode: 0644] blob
tests/tabix_data/example_badcomments.bed.gz [new file with mode: 0644] blob
tests/tabix_data/example_badcomments.bed.gz.tbi [new file with mode: 0644] blob
tests/tabix_data/example_badcomments.gtf.gz [new file with mode: 0644] blob
tests/tabix_data/example_badcomments.gtf.gz.tbi [new file with mode: 0644] blob
tests/tabix_data/example_badcomments.sam.gz [new file with mode: 0644] blob
tests/tabix_data/example_badcomments.sam.gz.tbi [new file with mode: 0644] blob
tests/tabix_data/example_badcomments.vcf.gz [new file with mode: 0644] blob
tests/tabix_data/example_badcomments.vcf.gz.tbi [new file with mode: 0644] blob
tests/tabix_data/example_comments.bed.gz [new file with mode: 0644] blob
tests/tabix_data/example_comments.bed.gz.tbi [new file with mode: 0644] blob
tests/tabix_data/example_comments.gtf.gz [new file with mode: 0644] blob
tests/tabix_data/example_comments.gtf.gz.tbi [new file with mode: 0644] blob
tests/tabix_data/example_comments.sam.gz [new file with mode: 0644] blob
tests/tabix_data/example_comments.sam.gz.tbi [new file with mode: 0644] blob
tests/tabix_data/example_comments.vcf.gz [new file with mode: 0644] blob
tests/tabix_data/example_comments.vcf.gz.tbi [new file with mode: 0644] blob
tests/tabix_data/example_unicode.vcf [new file with mode: 0644] blob
tests/tabix_data/gtf_toofew_fields.gtf.gz [new file with mode: 0644] blob
tests/tabix_data/gtf_toomany_fields.gtf.gz [new file with mode: 0644] blob
tests/tabix_data/gtf_wrong_fields.gtf.gz [new file with mode: 0644] blob
tests/tabix_data/vcf/10.vcf [new file with mode: 0644] blob
tests/tabix_data/vcf/11.vcf [new file with mode: 0644] blob
tests/tabix_data/vcf/12.vcf [new file with mode: 0644] blob
tests/tabix_data/vcf/13.vcf [new file with mode: 0644] blob
tests/tabix_data/vcf/15.vcf [new file with mode: 0644] blob
tests/tabix_data/vcf/16.vcf [new file with mode: 0644] blob
tests/tabix_data/vcf/18.vcf [new file with mode: 0644] blob
tests/tabix_data/vcf/2.vcf [new file with mode: 0644] blob
tests/tabix_data/vcf/20.vcf [new file with mode: 0644] blob
tests/tabix_data/vcf/21.vcf [new file with mode: 0644] blob
tests/tabix_data/vcf/22.vcf [new file with mode: 0644] blob
tests/tabix_data/vcf/23.vcf [new file with mode: 0644] blob
tests/tabix_data/vcf/24.vcf [new file with mode: 0644] blob
tests/tabix_data/vcf/3.vcf [new file with mode: 0644] blob
tests/tabix_data/vcf/4.vcf [new file with mode: 0644] blob
tests/tabix_data/vcf/5.vcf [new file with mode: 0644] blob
tests/tabix_data/vcf/6.vcf [new file with mode: 0644] blob
tests/tabix_data/vcf/7.vcf [new file with mode: 0644] blob
tests/tabix_data/vcf/8.vcf [new file with mode: 0644] blob
tests/tabix_data/vcf/9.vcf [new file with mode: 0644] blob
tests/tabix_data/vcf/README.txt [new file with mode: 0644] blob
tests/tabix_data/vcf/issue85.vcf [new file with mode: 0644] blob
tests/tabix_test.py [new file with mode: 0644] blob
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